<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>happy accident on Polypompholyx</title><link>https://polypompholyx.github.io/tag/happy-accident/</link><description>Recent content in happy accident on Polypompholyx</description><generator>Hugo</generator><language>en-GB</language><copyright>Except where otherwise noted, content on this site is licensed under a Creative Commons CC-BY-SA-3.0 licence, Steve Cook</copyright><lastBuildDate>Sat, 09 Feb 2013 11:58:32 +0000</lastBuildDate><atom:link href="https://polypompholyx.github.io/tag/happy-accident/feed.xml" rel="self" type="application/rss+xml"/><item><title>Illuminating error</title><link>https://polypompholyx.github.io/2013/02/illuminating-error/</link><pubDate>Sat, 09 Feb 2013 11:17:34 +0000</pubDate><guid>https://polypompholyx.github.io/2013/02/illuminating-error/</guid><description>&lt;p&gt;Yesterday&amp;rsquo;s first-year biology practical involved forcing the laboratory work-horse bacterium &lt;em&gt;Escherichia coli&lt;/em&gt; to take up a circular piece of DNA called &lt;a href="http://en.wikipedia.org/wiki/PGLO" title="pGLO at Wikipedia"&gt;pGLO&lt;/a&gt;.&lt;/p&gt;&#10;&lt;p&gt;pGLO contains a few genes, but the most interesting of these DNA sequences encodes a protein from a jellyfish. This protein fluoresces green under UV light, and goes by the thoroughly unimaginative name of &lt;a href="http://en.wikipedia.org/wiki/Green_fluorescent_protein" title="GFP at Wikipedia"&gt;green fluorescent protein (GFP)&lt;/a&gt;. The production of the GFP is regulated by a second DNA sequence, this time taken from a bacterium. The normal job of this regulatory DNA sequence is to switch on and off the production of enzymes that degrade an uncommon sugar called arabinose. Since bacteria don&amp;rsquo;t often encounter arabinose, &lt;a href="http://en.wikipedia.org/wiki/L-arabinose_operon" title="Arabinose operon at Wikipedia"&gt;the enzymes are not produced unless there is actually some arabinose around to eat&lt;/a&gt;. This save resources.&lt;/p&gt;</description></item></channel></rss>